STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH88176.1Transcriptional regulator, TetR family; Function of strongly homologous gene; regulator. (215 aa)    
Predicted Functional Partners:
CCH88171.1
Homologs of previously reported genes of unknown function.
 
     0.656
CCH88156.1
Putative salicylate hydroxylase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
     0.547
CCH88177.1
Beta-glucosidase; Function of strongly homologous gene; enzyme; Belongs to the glycosyl hydrolase 3 family.
       0.539
CCH88178.1
Luciferase-like monooxygenase; Function of strongly homologous gene; enzyme.
       0.539
CCH88179.1
Flavin reductase domain protein FMN-binding; Function of strongly homologous gene; enzyme.
     
 0.457
CCH88180.1
FAD-binding monooxygenase; Function of strongly homologous gene; enzyme.
 
     0.409
CCH89000.1
Phosphoesterase, PA-phosphatase related; Function of strongly homologous gene; enzyme.
  
     0.404
CCH88175.1
Putative ABC-type dipeptide transport system, extracellular component; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.
       0.402
CCH88189.1
Pyranose oxidase; Function of strongly homologous gene; enzyme.
 
    0.400
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.