STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH88179.1Flavin reductase domain protein FMN-binding; Function of strongly homologous gene; enzyme. (384 aa)    
Predicted Functional Partners:
CCH88178.1
Luciferase-like monooxygenase; Function of strongly homologous gene; enzyme.
 
    0.746
CCH88177.1
Beta-glucosidase; Function of strongly homologous gene; enzyme; Belongs to the glycosyl hydrolase 3 family.
       0.631
ribBA
Riboflavin biosynthesis protein ribBA [Includes: 3,4-dihydroxy-2-butanone 4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family.
  
  
 0.595
CCH88157.1
Phthalate 4,5-dioxygenase (modular protein); Function of strongly homologous gene; enzyme; Belongs to the cytochrome P450 family.
 
  
 0.523
CCH88180.1
FAD-binding monooxygenase; Function of strongly homologous gene; enzyme.
  
  
 0.502
metH
B12-dependent homocysteine-N5-methyltetrahydrofolate transmethylase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
       0.475
CCH88176.1
Transcriptional regulator, TetR family; Function of strongly homologous gene; regulator.
     
 0.457
CCH88185.1
Oxidoreductase; Function of strongly homologous gene; enzyme.
  
    0.447
CCH87536.1
Allophanate hydrolase subunit 1; Function of strongly homologous gene; enzyme.
  
    0.445
CCH88181.1
Glycoside hydrolase family 2, sugar binding; Function of strongly homologous gene; enzyme.
  
    0.445
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.