STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
CCH88193.1ABC transporter permease protein; Function of strongly homologous gene; transporter. (313 aa)    
Predicted Functional Partners:
CCH88192.1
Dipeptide ABC transporter permease and ATP-binding protein; Function of strongly homologous gene; transporter; Belongs to the binding-protein-dependent transport system permease family.
 
 0.996
CCH88173.1
ABC transporter ATP-binding protein, putative oligo/dipeptide transport protein (modular protein); Function of strongly homologous gene; transporter; Belongs to the binding-protein-dependent transport system permease family.
 
 0.988
CCH87620.1
Oligopeptide/dipeptide ABC transporter, ATPase subunit; Function of strongly homologous gene; transporter; Belongs to the binding-protein-dependent transport system permease family.
 
 0.986
CCH88396.1
Dipeptide ABC transporter permease and ATP-binding protein; Function of strongly homologous gene; transporter.
 
 0.986
CCH89595.1
Oligopeptide/dipeptide ABC transporter, ATPase subunit; Function of strongly homologous gene; transporter; Belongs to the binding-protein-dependent transport system permease family.
 0.986
CCH88191.1
ABC transporter ATP-binding protein; Function of strongly homologous gene; transporter.
 
 0.981
CCH88194.1
ABC-type dipeptide transport system, Extracellular component; Function of strongly homologous gene; transporter.
 0.952
appC
Oligopeptide transport system permease protein appC; Function of strongly homologous gene; transporter.
 0.939
CCH86582.1
Putative peptide transport permease; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.
 0.929
CCH88344.1
ABC-type oligopeptide transport permease; Function of strongly homologous gene; transporter.
 0.928
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
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