STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH88194.1ABC-type dipeptide transport system, Extracellular component; Function of strongly homologous gene; transporter. (511 aa)    
Predicted Functional Partners:
CCH88192.1
Dipeptide ABC transporter permease and ATP-binding protein; Function of strongly homologous gene; transporter; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.946
CCH88193.1
ABC transporter permease protein; Function of strongly homologous gene; transporter.
 
 0.944
CCH88396.1
Dipeptide ABC transporter permease and ATP-binding protein; Function of strongly homologous gene; transporter.
 
 
 0.884
CCH88174.1
Oligopeptide ABC transporter, permease protein; Function of strongly homologous gene; transporter.
 
 0.866
CCH88173.1
ABC transporter ATP-binding protein, putative oligo/dipeptide transport protein (modular protein); Function of strongly homologous gene; transporter; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.863
CCH88395.1
ABC transporter permease protein; Function of strongly homologous gene; transporter.
 
 0.858
CCH88191.1
ABC transporter ATP-binding protein; Function of strongly homologous gene; transporter.
 
  
 0.855
CCH87620.1
Oligopeptide/dipeptide ABC transporter, ATPase subunit; Function of strongly homologous gene; transporter; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.852
CCH87619.1
Binding-protein-dependent transport systems inner membrane component; Function of strongly homologous gene; transporter.
 
 0.846
CCH89594.1
Peptide transport permease; Function of strongly homologous gene; transporter.
 
 0.844
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.