STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH88213.1Putative acetyltransferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (130 aa)    
Predicted Functional Partners:
CCH88214.1
Homologs of previously reported genes of unknown function.
       0.581
CCH88212.1
Homologs of previously reported genes of unknown function.
       0.491
CCH90700.1
Putative aromatic amino acid beta-eliminating lyase/threonine aldolase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
 
  0.455
CCH86243.1
Transcriptional regulator, XRE family; Function of strongly homologous gene; regulator.
  
 
 0.424
CCH88055.1
Acetyltransferase; Function of strongly homologous gene; enzyme.
 
 0.422
CCH89966.1
Acetyltransferase, N-acetylglutamate synthase; Function of strongly homologous gene; enzyme.
 
 0.408
CCH86438.1
L-threonine ammonia-lyase; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
    
 0.406
CCH88120.1
Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme; Belongs to the DegT/DnrJ/EryC1 family.
 
 
 0.405
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
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