STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH88242.1Sulfatase-modifying factor 1; Function of strongly homologous gene; factor. (310 aa)    
Predicted Functional Partners:
CCH88439.1
Putative arylsulfatase (modular protein); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
   0.944
CCH88386.1
Arylsulfatase; Function of strongly homologous gene; enzyme.
 
   0.821
CCH88227.1
Putative arylsulfatase, N-terminal; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
   0.816
CCH88226.1
Putative acid phosphatase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
     0.617
CCH88241.1
Putative Sulphate transporter/antisigma-factor antagonist; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; factor.
       0.603
CCH87257.1
Serine/threonine protein kinase; Function of strongly homologous gene; enzyme.
 
 
 0.517
CCH89352.1
Homologs of previously reported genes of unknown function.
 
     0.476
CCH87838.1
Glutamine amidotransferases class-II; Function of strongly homologous gene; enzyme.
  
 
 0.462
CCH88205.1
Glutamine amidotransferase; Function of strongly homologous gene; enzyme.
  
 
 0.462
ribBA
Riboflavin biosynthesis protein ribBA [Includes: 3,4-dihydroxy-2-butanone 4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family.
    
  0.426
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.