STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH88283.1X-Pro dipeptidyl-peptidase, C-terminal domain; Function of strongly homologous gene; enzyme. (556 aa)    
Predicted Functional Partners:
vaoA
Vanillyl-alcohol oxidase; Function of strongly homologous gene; enzyme.
 
     0.659
CCH87607.1
Homologs of previously reported genes of unknown function.
  
     0.594
faeB
Feruloyl esterase; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
 
     0.589
CCH88187.1
Glycoside hydrolase; Function of strongly homologous gene; enzyme.
  
     0.549
CCH88284.1
Phenylacetaldehyde dehydrogenase; Function of strongly homologous gene; enzyme; Belongs to the aldehyde dehydrogenase family.
       0.519
purU
Formyltetrahydrofolate deformylase (Formyl-FH(4) hydrolase); Catalyzes the hydrolysis of 10-formyltetrahydrofolate (formyl-FH4) to formate and tetrahydrofolate (FH4).
       0.459
fahA-2
Fumarylacetoacetase; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
 
    0.458
CCH86939.1
Monoxygenase; Function of strongly homologous gene; enzyme.
  
     0.429
CCH88314.1
Dimethylglycine oxidase; Function of strongly homologous gene; enzyme; Belongs to the GcvT family.
  
     0.420
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.