STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH88323.1Ferredoxin reductase; Function of strongly homologous gene; enzyme. (390 aa)    
Predicted Functional Partners:
hcaC
3-phenylpropionate/cinnamic acid dioxygenase ferredoxin subunit; Function of strongly homologous gene; enzyme.
 
 
 0.946
nasC
Assimilatory nitrate reductase catalytic subunit; Function of strongly homologous gene; enzyme; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 
  
 0.915
sufE
Ferredoxin containing [2Fe-2S] Rieske domain; Function of strongly homologous gene; carrier.
 
 
 0.733
gltB
Glutamate synthase [NADPH] large chain (NADPH-GOGAT); Function of homologous gene experimentally demonstrated in an other organism; enzyme.
  
  
 0.718
CCH88157.1
Phthalate 4,5-dioxygenase (modular protein); Function of strongly homologous gene; enzyme; Belongs to the cytochrome P450 family.
 
  
 0.703
CCH87514.1
Oxidoreductase FAD-binding; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the globin family.
  
  
 0.660
hemD
Uroporphyrinogen-III C-methyltransferase; Function of strongly homologous gene; enzyme.
  
  
 0.607
cysG
Uroporphyrinogen-III C-methyltransferase; Function of strongly homologous gene; enzyme.
  
  
 0.593
CCH86015.1
Putative Ferredoxin containing a Rieske (2Fe-2S) iron-sulphur domain; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; carrier.
  
 
 0.572
CCH86224.1
Putative Rieske (2Fe-2S) domain ferredoxin; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative carrier.
  
 
 0.572
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
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