STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH88325.1Chloride channel core; Function of strongly homologous gene; structure. (478 aa)    
Predicted Functional Partners:
CCH88219.1
Homologs of previously reported genes of unknown function.
 
     0.660
CCH90608.1
PTS system, fructose subfamily, IIC subunit; Function of strongly homologous gene; transporter.
     
 0.546
CCH88212.1
Homologs of previously reported genes of unknown function.
 
     0.508
CCH87884.1
Putative multidrug resistance transporter, MFS family protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.
  
    0.494
CCH89024.1
Integral membrane protein of unknown function (modular protein); No homology to any previously reported sequences.
 
     0.494
CCH87858.1
Homologs of previously reported genes of unknown function.
  
     0.487
CCH88229.1
Homologs of previously reported genes of unknown function.
 
     0.455
bfrB
Bacterioferritin bfrB; Iron-storage protein.
 
   
 0.422
CCH88324.1
Choline/carnitine/betaine transporter; Function of strongly homologous gene; transporter; Belongs to the BCCT transporter (TC 2.A.15) family.
       0.414
nnrE
Carbohydrate kinase; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow the repair of both epim [...]
       0.410
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
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