STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH88335.1Alcohol dehydrogenase GroES domain protein; Function of strongly homologous gene; enzyme. (355 aa)    
Predicted Functional Partners:
CCH90687.1
Putative L-threonine 3-dehydrogenase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
  
 
0.927
CCH87825.1
Alcohol dehydrogenase, zinc-binding domain protein; Function of strongly homologous gene; enzyme.
  
  
 
0.925
CCH90608.1
PTS system, fructose subfamily, IIC subunit; Function of strongly homologous gene; transporter.
  
 
 0.912
xylA
Xylose isomerase; Function of strongly homologous gene; enzyme; Belongs to the xylose isomerase family.
     
 0.906
frk
Sugar kinase, ribokinase; Function of strongly homologous gene; enzyme.
  
 
 0.903
CCH87902.1
Ribokinase; Function of strongly homologous gene; enzyme; Belongs to the carbohydrate kinase PfkB family.
  
 
 0.903
CCH87704.1
Putative xylitol oxidase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
     
  0.900
rbsA-4
Ribose import ATP-binding protein rbsA; Function of strongly homologous gene; enzyme.
  
    0.780
rbsC-2
Ribose transport system permease protein rbsC; Function of strongly homologous gene; enzyme; Belongs to the binding-protein-dependent transport system permease family.
  
    0.777
CCH88349.1
Putative alcohol dehydrogenase adh (fragment); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
     0.773
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.