Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
adhB-3Alcohol dehydrogenase B; Function of strongly homologous gene; enzyme. (369 aa)    
Predicted Functional Partners:
CCH88351.1
Aldehyde dehydrogenase; Function of strongly homologous gene; enzyme; Belongs to the aldehyde dehydrogenase family.
  
 0.803
adhfe
Alcohol dehydrogenase, iron-type; Function of strongly homologous gene; enzyme.
    
 0.599
CCH88356.1
Short-chain dehydrogenase/reductase SDR; Function of strongly homologous gene; enzyme; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
  
 0.521
CCH88349.1
Putative alcohol dehydrogenase adh (fragment); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
 
 
0.520
adhB-2
Alcohol dehydrogenase B; Function of strongly homologous gene; enzyme.
 
    
0.477
CCH89289.1
L-threonine 3-dehydrogenase; Function of strongly homologous gene; enzyme.
  
 
 
0.473
CCH87678.1
Putative alcohol dehydrogenase (Zinc-containing) (AdhT-like); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
 
 
0.436
adh-3
Alcohol dehydrogenase (Zinc-containing) (AdhT-like); Function of strongly homologous gene; enzyme.
  
 
 
0.432
CCH86859.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
  
  
 0.428
csoR
Copper-sensing transcriptional repressor csoR; Function of homologous gene experimentally demonstrated in an other organism; regulator.
  
  
 0.428
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
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