STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
CCH88355.1Putative Amidohydrolase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (300 aa)    
Predicted Functional Partners:
scoB
3-oxoacid CoA-transferase subunit B; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
  
  
 0.777
scoA
3-oxoacid CoA-transferase subunit A; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
       0.773
CCH88356.1
Short-chain dehydrogenase/reductase SDR; Function of strongly homologous gene; enzyme; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
       0.773
pheB
Metapyrocatechase; Function of strongly homologous gene; enzyme.
 
  
 0.705
CCH85828.1
3-oxoacyl-[acyl-carrier-protein] reductase; Function of strongly homologous gene; enzyme.
  
 
  0.606
pobA
P-hydroxybenzoate hydroxylase; Function of strongly homologous gene; enzyme.
 
    0.580
gcvT
Aminomethyltransferase; Function of strongly homologous gene; enzyme; Belongs to the GcvT family.
  
 
  0.489
CCH88372.1
Putative 4-hydroxyphenylpyruvate dioxygenase containing a TIM-barrel fold (N-ter); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
    0.484
CCH88286.1
Glycine cleavage T protein (Aminomethyl transferase); Function of strongly homologous gene; enzyme.
  
 
  0.465
CCH88257.1
Homologs of previously reported genes of unknown function.
 
  
 0.459
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
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