STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
trxB-2Thioredoxin reductase; Function of homologous gene experimentally demonstrated in an other organism; enzyme. (326 aa)    
Predicted Functional Partners:
trxA-2
Thioredoxin 1, redox factor; Function of homologous gene experimentally demonstrated in an other organism; carrier; Belongs to the thioredoxin family.
 
 0.985
selD
Selenophosphate synthase; Synthesizes selenophosphate from selenide and ATP.
     
 0.907
CCH89838.1
Putative cystathionine gamma-lyase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
   
 
 0.907
sufS
Cysteine desulfurase; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family.
  
 
  0.903
trxA
Thioredoxin; Function of strongly homologous gene; carrier; Belongs to the thioredoxin family.
 
 0.875
CCH88369.1
Putative CoA synthetase, long-chain fatty acid:CoA ligase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
    0.742
CCH89901.1
Thioredoxin; Function of strongly homologous gene; carrier.
 
 
 0.680
CCH88368.1
Putative enoyl-CoA hydratase 1; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
       0.657
clpB
Protein disaggregation chaperone; Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE; Belongs to the ClpA/ClpB family.
 
   
 0.635
fabI
Enoyl-[acyl-carrier-protein] reductase [NADH]; Function of strongly homologous gene; enzyme.
   
  
 0.591
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.