STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH88377.1Carboxylesterase; Function of strongly homologous gene; enzyme; Belongs to the type-B carboxylesterase/lipase family. (483 aa)    
Predicted Functional Partners:
CCH88390.1
Carboxylesterase; Function of strongly homologous gene; enzyme.
  
     0.660
CCH88837.1
Membrane metallopeptidase; Function of strongly homologous gene; enzyme.
 
 0.660
rpsK
30S ribosomal subunit protein S11; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family.
    
  0.628
rpsA
30S ribosomal protein S1; Function of homologous gene experimentally demonstrated in an other organism; structure.
   
 
  0.614
gmk
Guanylate kinase; Essential for recycling GMP and indirectly, cGMP.
   
 0.607
CCH87937.1
Peptidase M28; Function of strongly homologous gene; enzyme.
  
 0.598
CCH87616.1
Putative acetyl esterase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
  
 0.589
CCH88376.1
Putative 3-(2-hydroxyphenyl) propionic acid transporter; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.
       0.578
rpsD
30S ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit.
    
  0.554
rpsD-2
30S ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit.
    
  0.554
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.