STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH88386.1Arylsulfatase; Function of strongly homologous gene; enzyme. (783 aa)    
Predicted Functional Partners:
CCH88441.1
Sulfatase-modifying factor; Function of strongly homologous gene; cell process.
 
   0.810
CCH88242.1
Sulfatase-modifying factor 1; Function of strongly homologous gene; factor.
 
   0.804
CCH88226.1
Putative acid phosphatase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
     0.788
CCH88439.1
Putative arylsulfatase (modular protein); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
     0.751
CCH89352.1
Homologs of previously reported genes of unknown function.
 
     0.718
CCH88385.1
Protein of unknown function; No homology to any previously reported sequences.
       0.536
rpoB
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 
 0.504
CCH88481.1
Membrane protein of unknown function; No homology to any previously reported sequences.
  
     0.481
CCH86968.1
Homologs of previously reported genes of unknown function.
   
 0.449
glgC
Glucose-1-phosphate adenylyltransferase; Function of strongly homologous gene; enzyme; Belongs to the bacterial/plant glucose-1-phosphate adenylyltransferase family.
   
    0.412
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.