STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH88391.1Oxidoreductase; Function of strongly homologous gene; enzyme. (331 aa)    
Predicted Functional Partners:
CCH86530.1
Dehydrogenase; Function of strongly homologous gene; enzyme.
  
     0.736
CCH87677.1
Putative dehydrogenase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
     0.719
CCH88390.1
Carboxylesterase; Function of strongly homologous gene; enzyme.
       0.682
CCH88120.1
Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme; Belongs to the DegT/DnrJ/EryC1 family.
  
 0.537
CCH88392.1
Inosine-uridine preferring nucleoside hydrolase; Function of strongly homologous gene; enzyme.
  
    0.537
CCH88393.1
Transcriptional regulator, TetR family; Function of strongly homologous gene; factor.
       0.528
CCH88389.1
Exported protein of unknown function; No homology to any previously reported sequences.
  
  
 0.458
CCH88185.1
Oxidoreductase; Function of strongly homologous gene; enzyme.
  
     0.456
CCH88164.1
Homologs of previously reported genes of unknown function.
 
  
 0.453
CCH88330.1
Putative Xylose isomerase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
  
 0.431
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.