STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CCH88391.1Oxidoreductase; Function of strongly homologous gene; enzyme. (331 aa)    
Predicted Functional Partners:
CCH86530.1
Dehydrogenase; Function of strongly homologous gene; enzyme.
  
     0.736
CCH87677.1
Putative dehydrogenase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
     0.719
CCH88390.1
Carboxylesterase; Function of strongly homologous gene; enzyme.
       0.682
CCH88392.1
Inosine-uridine preferring nucleoside hydrolase; Function of strongly homologous gene; enzyme.
  
    0.539
CCH88393.1
Transcriptional regulator, TetR family; Function of strongly homologous gene; factor.
       0.528
CCH88389.1
Exported protein of unknown function; No homology to any previously reported sequences.
  
 
 0.511
CCH88164.1
Homologs of previously reported genes of unknown function.
 
 
 0.483
CCH88120.1
Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme; Belongs to the DegT/DnrJ/EryC1 family.
 
 
 0.469
CCH88185.1
Oxidoreductase; Function of strongly homologous gene; enzyme.
  
     0.456
galK-2
Galactokinase; Function of strongly homologous gene; enzyme; Belongs to the GHMP kinase family. GalK subfamily.
 
 0.437
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.