STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
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Gene Fusion
Cooccurrence
Coexpression
Experiments
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[Homology]
Score
CCH88439.1Putative arylsulfatase (modular protein); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (577 aa)    
Predicted Functional Partners:
CCH88242.1
Sulfatase-modifying factor 1; Function of strongly homologous gene; factor.
 
   0.944
CCH88441.1
Sulfatase-modifying factor; Function of strongly homologous gene; cell process.
 
   0.943
CCH88386.1
Arylsulfatase; Function of strongly homologous gene; enzyme.
 
  
  0.839
CCH88227.1
Putative arylsulfatase, N-terminal; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
  
  0.835
CCH88438.1
Sodium symporter; Function of strongly homologous gene; transporter.
       0.773
CCH88440.1
Sulphate transporter; Function of strongly homologous gene; transporter.
     
 0.543
CCH89352.1
Homologs of previously reported genes of unknown function.
 
     0.525
CCH88437.1
Sulphate transporter; Function of strongly homologous gene; transporter.
     
 0.517
CCH88226.1
Putative acid phosphatase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
     0.455
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
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