STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
uidA-2Beta-glucuronidase; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the glycosyl hydrolase 2 family. (584 aa)    
Predicted Functional Partners:
uidB
Glucuronide transporter:cation symporter; Function of strongly homologous gene; transporter.
 
 
 0.706
CCH88446.1
Gluconolactonase; Function of strongly homologous gene; enzyme.
    
  0.702
uxaC
Uronate isomerase; Function of strongly homologous gene; enzyme.
 
  
 0.595
uxaC-2
Uronate isomerase; Function of strongly homologous gene; enzyme.
 
  
 0.593
aglA
Glycosidase; Function of strongly homologous gene; enzyme.
   
  
 0.543
aglA-2
Alpha-glucosidase; Function of strongly homologous gene; enzyme.
   
  
 0.543
aglA-3
Alpha-glucosidase; Function of strongly homologous gene; enzyme.
   
  
 0.543
CCH87760.1
Aldose 1-epimerase; Converts alpha-aldose to the beta-anomer.
 
 
 0.521
CCH88187.1
Glycoside hydrolase; Function of strongly homologous gene; enzyme.
 
 
 0.479
CCH88443.1
PTS system, beta-glucoside-specific IIABC component; Function of strongly homologous gene; enzyme.
  
  
 0.474
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.