STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
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[Homology]
Score
CCH88464.1Putative Predicted xylanase/chitin deacetylase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (310 aa)    
Predicted Functional Partners:
CCH88463.1
Extradiol aromatic ring-opening dioxygenase; Function of strongly homologous gene; enzyme.
       0.714
ureG-2
Urease accessory protein UreG (modular protein); Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG.
       0.498
CCH88462.1
Protein of unknown function; No homology to any previously reported sequences.
       0.432
CCH85891.1
Dolichyl-phosphate-mannose--protein O-mannosyl transferase; Function of strongly homologous gene; transporter.
  
 
 0.400
CCH86650.1
Glycosyl transferase; Function of strongly homologous gene; enzyme.
  
 
 0.400
CCH89906.1
Membrane protein of unknown function; No homology to any previously reported sequences.
  
 
 0.400
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.