STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
CCH88507.1Putative PAS/PAC sensor protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative receptor. (250 aa)    
Predicted Functional Partners:
CCH85645.1
Serine phosphatase RsbU, regulator of sigma subunit; Function of strongly homologous gene; enzyme.
 
     0.865
CCH88508.1
Putative PAS/PAC sensor protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative receptor.
     0.843
CCH90914.1
Putative PAS/PAC sensor protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative receptor.
 
     0.739
CCH87909.1
Protein of unknown function; No homology to any previously reported sequences.
  
     0.700
CCH90880.1
Putative PAS/PAC sensor protein (fragment); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative receptor.
 
     0.639
CCH89172.1
Putative PAS/PAC sensor protein (fragment); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative receptor.
 
     0.628
cheR
Chemotaxis protein methyltransferase; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
  
  
  0.617
CCH85537.1
Sensor phosphatase; Function of strongly homologous gene; enzyme.
 
     0.615
CCH88310.1
Putative PAS/PAC sensor protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative receptor.
 
     0.610
CCH89209.1
Putative PAS/PAC sensor protein (fragment); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative receptor.
 
     0.606
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.