Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
CCH88544.12,5-didehydrogluconate reductase; Function of strongly homologous gene; enzyme. (292 aa)    
Predicted Functional Partners:
CCH88542.1
Homologs of previously reported genes of unknown function.
     0.902
CCH88543.1
Short-chain dehydrogenase/reductase; Function of strongly homologous gene; enzyme; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
  
 0.779
CCH86438.1
L-threonine ammonia-lyase; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
  
 
 0.652
CCH88540.1
Major facilitator superfamily MFS_1; Function of strongly homologous gene; transporter.
    
  0.602
CCH88541.1
Protein of unknown function; No homology to any previously reported sequences.
       0.581
CCH88545.1
Transcriptional regulator (fragment); Function of strongly homologous gene; regulator.
       0.517
CCH88546.1
Transcriptional regulator, XRE family; Function of strongly homologous gene; regulator.
       0.517
CCH85610.1
Polyketide beta-ketoacyl synthase 2; Function of strongly homologous gene; enzyme; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
     
  0.500
CCH88538.1
NAD-dependent epimerase/dehydratase; Function of strongly homologous gene; enzyme.
  
   0.472
pheB
Metapyrocatechase; Function of strongly homologous gene; enzyme.
  
 0.468
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
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