STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH88560.1Homologs of previously reported genes of unknown function. (194 aa)    
Predicted Functional Partners:
CCH88559.1
Homologs of previously reported genes of unknown function.
 
     0.950
CCH88561.1
Homologs of previously reported genes of unknown function.
 
     0.882
CCH89224.1
Homologs of previously reported genes of unknown function.
 
  
 0.849
MODMU_3134
Fragment of putative Flp pilus assembly protein TadB (part 1); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative cell process.
 
    0.830
fliM
Flagellar motor switch protein; Function of strongly homologous gene; structure.
  
  
 0.818
flgB
Flagellar basal-body rod protein FlgB; Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body.
  
  
 0.818
fliP
Flagellar transport protein FliP; Plays a role in the flagellum-specific transport system. Belongs to the FliP/MopC/SpaP family.
  
  
 0.817
fliL
Flagellar basal body-associated protein; Function of strongly homologous gene; structure.
  
  
 0.816
flgD
Flagellar hook capping protein; Function of strongly homologous gene; structure.
  
  
 0.816
fliF
Flagellar basal-body M-ring protein/flagellar hook-basal body protein FliF; The M ring may be actively involved in energy transduction. Belongs to the FliF family.
  
  
 0.816
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.