STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Cooccurrence
Coexpression
Experiments
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[Homology]
Score
CCH88564.1Putative prepilin leader peptidase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (212 aa)    
Predicted Functional Partners:
CCH87178.1
ComEC/Rec2-related protein (modular protein); Function of strongly homologous gene; cell process.
  
  
 0.704
CCH89789.1
DNA protecting protein DprA; Function of strongly homologous gene; cell process.
  
  
 0.528
CCH89791.1
DNA protecting protein DprA; Function of strongly homologous gene; structure.
  
  
 0.528
CCH88565.1
DNA binding excisionase; Function of strongly homologous gene; enzyme.
       0.442
CCH88563.1
Protein of unknown function; No homology to any previously reported sequences.
       0.433
CCH87177.1
Competence protein ComEA-like protein with helix-hairpin-helix repeat region; Function of strongly homologous gene; cell process.
   
  
 0.418
CCH88987.1
Homologs of previously reported genes of unknown function.
   
  
 0.418
CCH89487.1
Homologs of previously reported genes of unknown function.
   
  
 0.418
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.