STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ugpCGlycerol-3-phosphate ABC transporter ATP-binding protein; Function of strongly homologous gene; transporter; Belongs to the ABC transporter superfamily. (357 aa)    
Predicted Functional Partners:
CCH89719.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family; Function of strongly homologous gene; transporter.
 
 0.990
CCH89718.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family; Function of strongly homologous gene; transporter.
 0.988
CCH88577.1
Substrate-binding ABC permease; Function of strongly homologous gene; transporter.
 
 0.980
CCH86031.1
Sugar transport systems inner membrane protein; Function of strongly homologous gene; transporter.
 
 0.976
CCH86030.1
Sugar transport integral membrane protein; Function of strongly homologous gene; transporter.
 0.965
CCH88576.1
Carbohydrate ABC transporter membrane protein; Function of strongly homologous gene; transporter.
 
 0.962
CCH86032.1
Extracellular solute-binding protein, family 1; Function of strongly homologous gene; transporter.
  
 0.937
CCH89720.1
Carbohydrate ABC transporter substrate-binding protein, CUT1 family; Function of strongly homologous gene; transporter.
  
 0.937
modB
Molybdenum transport system permease protein modB; Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.
  
 0.934
CCH88578.1
Extracellular sugar-binding lipoprotein; Function of strongly homologous gene; transporter.
  
 0.864
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.