STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH88576.1Carbohydrate ABC transporter membrane protein; Function of strongly homologous gene; transporter. (305 aa)    
Predicted Functional Partners:
CCH88577.1
Substrate-binding ABC permease; Function of strongly homologous gene; transporter.
 0.996
CCH88578.1
Extracellular sugar-binding lipoprotein; Function of strongly homologous gene; transporter.
 
 0.993
CCH86031.1
Sugar transport systems inner membrane protein; Function of strongly homologous gene; transporter.
 0.985
CCH89719.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family; Function of strongly homologous gene; transporter.
 0.976
CCH86029.1
ABC sugar transporter ATP-binding protein; Function of strongly homologous gene; transporter; Belongs to the ABC transporter superfamily.
 
 0.962
ugpC
Glycerol-3-phosphate ABC transporter ATP-binding protein; Function of strongly homologous gene; transporter; Belongs to the ABC transporter superfamily.
 
 0.962
ugpC-2
Sugar-binding transport ATP-binding protein; Function of strongly homologous gene; enzyme; Belongs to the ABC transporter superfamily.
 
 0.962
CCH89720.1
Carbohydrate ABC transporter substrate-binding protein, CUT1 family; Function of strongly homologous gene; transporter.
 
 0.884
CCH86032.1
Extracellular solute-binding protein, family 1; Function of strongly homologous gene; transporter.
 
 0.867
cysA
Sulfate/thiosulfate import ATP-binding protein CysA 2; Function of strongly homologous gene; enzyme; Belongs to the ABC transporter superfamily.
  
  
 0.559
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
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