STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH88598.1Glycosyltransferase; Function of strongly homologous gene; enzyme. (385 aa)    
Predicted Functional Partners:
CCH88597.1
Homologs of previously reported genes of unknown function.
 
     0.935
nudF
ADP-ribose pyrophosphatase; Function of strongly homologous gene; enzyme.
  
    0.778
pyrG
CTP synthase (UTP--ammonia ligase) (CTP synthetase); Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates.
  
    0.776
MODMU_3177
Fragment of Flagellin assembly, membrane protein MviN (part 1); Function of strongly homologous gene; structure.
 
  
 0.738
CCH88110.1
Capsular polysaccharide biosynthesis glycosyl transferase; Function of strongly homologous gene; enzyme.
  
     0.720
CCH88037.1
Homologs of previously reported genes of unknown function.
  
     0.689
CCH88126.1
Capsular polysaccharide biosynthesis glycosyl transferase; Function of strongly homologous gene; enzyme.
  
     0.602
CCH88933.1
Glycosyltransferase; Function of strongly homologous gene; enzyme.
  
     0.576
glgB
1,4-alpha-glucan-branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.
   
 0.545
treZ
Malto-oligosyltrehalose trehalohydrolase; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
   
 0.529
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
Server load: medium (42%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.