STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH88605.1Fatty acid desaturase; Function of strongly homologous gene; enzyme. (397 aa)    
Predicted Functional Partners:
CCH88606.1
Flavodoxin reductase; Function of strongly homologous gene; enzyme.
 
 0.999
CCH90864.1
Fatty acid desaturase; Function of strongly homologous gene; enzyme.
    
 0.921
CCH88608.1
Putative transcriptional regulator, PucR family; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator.
 
     0.868
CCH88157.1
Phthalate 4,5-dioxygenase (modular protein); Function of strongly homologous gene; enzyme; Belongs to the cytochrome P450 family.
  
  
 0.588
CCH85702.1
Saccharopine dehydrogenase; Function of strongly homologous gene; enzyme.
  
    0.522
CCH85787.1
Putative Acyl dehydratase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
   
 0.488
fadI
3-ketoacyl-CoA thiolase; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the thiolase-like superfamily. Thiolase family.
  
   
 0.487
fabG-2
3-oxoacyl-[acyl-carrier-protein] reductase; Function of strongly homologous gene; enzyme.
  
 
 
 0.469
CCH87000.1
Short-chain dehydrogenase/reductase SDR; Function of strongly homologous gene; enzyme; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
   
 0.465
pobB-2
Phthalate 4,5-dioxygenase; Function of strongly homologous gene; enzyme.
 
  
 0.436
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.