STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH88613.1Homologs of previously reported genes of unknown function. (112 aa)    
Predicted Functional Partners:
CCH88091.1
Homologs of previously reported genes of unknown function.
  
     0.757
CCH90427.1
Homologs of previously reported genes of unknown function.
  
     0.661
CCH90047.1
Homologs of previously reported genes of unknown function.
  
     0.625
CCH88820.1
Trp biosynthesis associated, transmembrane protein, Oprn/Chp; Function of strongly homologous gene; enzyme.
  
     0.554
CCH88611.1
Putative rRNA methylase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
       0.521
CCH88486.1
Metallophosphoesterase; Function of strongly homologous gene; enzyme.
  
     0.518
CCH89458.1
Membrane protein of unknown function; No homology to any previously reported sequences.
  
     0.513
CCH86315.1
Homologs of previously reported genes of unknown function.
  
     0.503
recN
DNA repair protein recN; May be involved in recombinational repair of damaged DNA.
       0.475
CCH86184.1
Homologs of previously reported genes of unknown function.
  
     0.461
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.