STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH88615.1Conserved protein of unknown function, putative Tetratricopeptide repeats; Homologs of previously reported genes of unknown function. (133 aa)    
Predicted Functional Partners:
CCH88614.1
Putative sugar phosphatase of HAD superfamily; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
   
 
 0.741
CCH90165.1
Putative Transcriptional regulator; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator.
    
 0.728
CCH87930.1
Protein of unknown function; No homology to any previously reported sequences.
  
 
 0.721
CCH88616.1
Conserved protein of unknown function, putative Hemopexin/matrixin domain; Homologs of previously reported genes of unknown function.
 
     0.714
CCH89435.1
Two-component sensor histidine kinase; Function of strongly homologous gene; enzyme.
   
 0.709
uvrD
DNA/RNA helicase, superfamily I; Function of strongly homologous gene; enzyme.
   
  0.709
acuC
Acetoin dehydrogenase; Function of strongly homologous gene; enzyme.
    
 0.681
ribBA
Riboflavin biosynthesis protein ribBA [Includes: 3,4-dihydroxy-2-butanone 4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family.
    
  0.641
CCH89464.1
Putative AAA+ family ATPase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
 0.641
CCH90047.1
Homologs of previously reported genes of unknown function.
  
     0.634
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.