STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
CCH88700.1Putative cytosine deaminase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (413 aa)    
Predicted Functional Partners:
CCH88698.1
Protein of unknown function; No homology to any previously reported sequences; Belongs to the low molecular weight phosphotyrosine protein phosphatase family.
  
    0.777
upp
Uracil phosphoribosyltransferase; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the UPRTase family.
 
 
 0.728
rihC
Non-specific ribonucleoside hydrolase rihC; Function of strongly homologous gene; enzyme.
 
 
 0.701
deoA
Thymidine phosphorylase; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
    
 0.651
pyrR
Bifunctional protein pyrR [Includes: Pyrimidine operon regulatory protein; Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant.
    
 0.628
hyuA
N-methylhydantoinase A/acetone carboxylase, beta subunit; Function of strongly homologous gene; enzyme.
     
  0.621
psuG
Indigoidine synthase A; Catalyzes the reversible cleavage of pseudouridine 5'- phosphate (PsiMP) to ribose 5-phosphate and uracil. Functions biologically in the cleavage direction, as part of a pseudouridine degradation pathway; Belongs to the pseudouridine-5'-phosphate glycosidase family.
     
  0.621
CCH88701.1
Putative permease; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.
       0.570
CCH86948.1
Putative creatinine amidohydrolase (Creatininase); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
  
 0.559
pyrD
Dihydroorotate dehydrogenase (catalytic subunit); Catalyzes the conversion of dihydroorotate to orotate.
  
 
 0.555
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
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