STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH88704.1Purine catabolism regulator-like protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; regulator. (646 aa)    
Predicted Functional Partners:
CCH88706.1
Homologs of previously reported genes of unknown function.
 
     0.899
CCH85640.1
Homologs of previously reported genes of unknown function.
 
     0.765
bar
Barbiturase; Responsible for the hydrolysis of barbituric acid (2,4,6- trihydroxy-1,3-pyrimidine), an intermediate in the oxidative catabolism of pyrimidines. Catalyzes the hydrolytic opening of the pyrimidine ring of barbituric acid to yield ureidomalonic acid; Belongs to the cyclic amide hydrolase (CyAH) family.
 
     0.765
sucD
Succinyl-CoA synthetase, alpha subunit; Function of strongly homologous gene; enzyme.
 
     0.753
CCH88705.1
Protein of unknown function; No homology to any previously reported sequences.
       0.732
rutG
Uracil-xanthine permease; Function of strongly homologous gene; transporter.
 
    0.686
hyuB
N-methylhydantoinase B/acetone carboxylase, alpha subunit; Function of strongly homologous gene; enzyme.
 
     0.678
CCH89894.1
Homologs of previously reported genes of unknown function.
  
     0.667
CCH86879.1
Transcriptional regulator, PucR family; Function of strongly homologous gene; regulator.
  
     0.617
coxL
Carbon-monoxide dehydrogenase, molybdopterin binding, large subunit; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
 
     0.586
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.