STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH88760.1Putative aryl-alcohol dehydrogenase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (334 aa)    
Predicted Functional Partners:
hisS
Histidyl-tRNA synthetase; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
       0.780
CCH88762.1
Putative enzymemetal binding hydrolase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
    0.780
aspS
Aspartyl-tRNA synthetase; Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps: L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp/Asn); Belongs to the class-II aminoacyl-tRNA synthetase family. Type 1 subfamily.
       0.631
ppiB-2
Putative peptidyl-prolyl cis-trans isomerase B; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
   
   0.597
CCH85610.1
Polyketide beta-ketoacyl synthase 2; Function of strongly homologous gene; enzyme; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
     
  0.499
CCH88507.1
Putative PAS/PAC sensor protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative receptor.
  
 
  0.462
CCH88764.1
Methyltransferase type 11; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
    0.443
xylA
Xylose isomerase; Function of strongly homologous gene; enzyme; Belongs to the xylose isomerase family.
  
     0.411
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.