STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CCH88783.1Putative Restriction endonuclease; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (131 aa)    
Predicted Functional Partners:
CCH88782.1
Homologs of previously reported genes of unknown function.
       0.618
CCH87750.1
Putative oxidoreductase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
     0.572
metH
B12-dependent homocysteine-N5-methyltetrahydrofolate transmethylase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
    
  0.572
CCH85890.1
Phosphatidylinositol alpha-mannosyltransferase; Function of strongly homologous gene; transporter.
  
     0.508
CCH87391.1
Homologs of previously reported genes of unknown function.
  
     0.494
CCH89683.1
Phosphoesterase PA-phosphatase; Function of strongly homologous gene; enzyme.
  
     0.476
CCH88002.1
Putative lipoprotein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative structure.
  
     0.469
CCH88784.1
Homologs of previously reported genes of unknown function.
       0.454
CCH86830.1
Homologs of previously reported genes of unknown function.
 
     0.448
CCH87751.1
Monooxygenase FAD-binding; Function of strongly homologous gene; enzyme.
  
     0.437
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.