STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CCH88809.1ABC-type branched-chain amino acid transport system, Extracellular ligand-binding receptor; Function of strongly homologous gene; transporter. (462 aa)    
Predicted Functional Partners:
CCH88804.1
ABC-type branched-chain amino acid transport system, permease component; Function of strongly homologous gene; transporter; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.919
CCH85831.1
High-affinity branched-chain amino acid ABC transporter, ATP binding protein (modular protein); Function of strongly homologous gene; enzyme.
 
 
 0.917
CCH88803.1
Branched-chain amino acid ABC-type transport system, permease component; Function of strongly homologous gene; transporter; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.914
CCH88806.1
ABC-type branched-chain amino acid transport systems, ATPase component; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; transporter.
 
 
 0.902
CCH88805.1
ABC-type branched-chain amino acid transport systems, ATPase component; Function of strongly homologous gene; enzyme.
 
 
 0.888
CCH87788.1
ABC transporter, permease protein; Function of strongly homologous gene; transporter; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.885
CCH87787.1
ABC transporter ATP-binding protein; Function of strongly homologous gene; transporter; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.856
CCH88265.1
ABC-type branched-chain amino acid transport system, permease component; Function of strongly homologous gene; transporter; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.824
CCH88266.1
Branched-chain amino acid ABC-type transport system, permease component; Function of strongly homologous gene; transporter; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.814
CCH85993.1
ABC-type branched-chain amino acid transport system, permease component; Function of strongly homologous gene; transporter; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.798
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
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