STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
sepFCell division protein sepF2; Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA. (277 aa)    
Predicted Functional Partners:
ftsZ
Cell division protein ftsZ; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity.
  
 
 0.968
CCH88858.1
YGGT family protein; Homologs of previously reported genes of unknown function.
  
  
 0.959
CCH88860.1
Conserved hypothetical protein; Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis; Belongs to the pyridoxal phosphate-binding protein YggS/PROSC family.
  
  
 0.947
CCH87968.1
Putative Excinuclease ABC, C subunit domain protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
 
 0.898
CCH88857.1
Cell-division initiation protein; Function of strongly homologous gene; cell process.
  
  
 0.883
pduG
Diol/glycerol dehydratase reactivating factor large subunit; Function of strongly homologous gene; enzyme.
  
 
 0.838
whiA
Sporulation transcription regulator whiA; Involved in cell division and chromosome segregation.
  
   
 0.784
pknB
Two component serine/threonine-protein kinase with PASTA sensor; Function of strongly homologous gene; enzyme.
 
   
 0.782
ftsQ
Membrane anchored protein involved in growth of wall at septum; Essential cell division protein; Belongs to the FtsQ/DivIB family. FtsQ subfamily.
 
  
 0.770
spk
Two-component serine/threonine-protein kinase PK-1; Function of strongly homologous gene; enzyme.
 
   
 0.752
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.