STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CCH88879.1Transglutaminase; Function of strongly homologous gene; enzyme. (782 aa)    
Predicted Functional Partners:
CCH88878.1
Homologs of previously reported genes of unknown function.
  
 0.969
CCH88877.1
ATPase associated with various cellular activities AAA_3; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
   
 0.935
CCH88995.1
Putative ATPase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
   
 0.735
CCH90763.1
Putative AAA-type ATPase enzymatic complex assembly chaperone, MoxR type; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
   
 0.590
mraZ
Putative protein mraZ; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative cell process; Belongs to the MraZ family.
       0.589
CCH90783.1
Putative MoxR-like ATPase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
   
 0.586
mraW
S-adenosyl-dependent methyl transferase; Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA.
       0.464
CCH88994.1
Homologs of previously reported genes of unknown function.
 
  
 0.461
CCH86035.1
Homologs of previously reported genes of unknown function.
 
  
 0.449
CCH86318.1
Homologs of previously reported genes of unknown function.
 
    0.419
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.