Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
pgsAPhosphatidylglycerophosphate synthase; Function of strongly homologous gene; enzyme. (222 aa)    
Predicted Functional Partners:
CCH85541.1
Competence/damage-inducible CinA-like protein; Function of strongly homologous gene; cell process; Belongs to the CinA family.
  
  
 0.810
CCH86232.1
Putative HAD hydrolase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
    0.739
CCH88898.1
Homologs of previously reported genes of unknown function.
  
     0.693
serB
Phosphoserine phosphatase; Function of strongly homologous gene; enzyme.
  
 
 0.680
CCH89894.1
Homologs of previously reported genes of unknown function.
 
    0.660
CCH90438.1
Homologs of previously reported genes of unknown function.
  
     0.660
CCH85720.1
Homologs of previously reported genes of unknown function.
  
     0.611
CCH88899.1
Glycosyl transferase family 2; Function of strongly homologous gene; enzyme.
 
     0.605
CCH87391.1
Homologs of previously reported genes of unknown function.
  
     0.590
estB
Extracellular esterase estB; Function of strongly homologous gene; enzyme.
       0.556
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
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