STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
estBExtracellular esterase estB; Function of strongly homologous gene; enzyme. (272 aa)    
Predicted Functional Partners:
CCH88906.1
Sigma E regulatory protein, MucB/RseB; Function of strongly homologous gene; regulator.
  
     0.741
CCH88904.1
ABC transporter membrane protein; Function of strongly homologous gene; transporter.
  
     0.627
CCH88043.1
Diacylglycerol kinase; Function of strongly homologous gene; enzyme.
     
 0.626
CCH90054.1
Diacylglycerol O-acyltransferase; Function of strongly homologous gene; enzyme; Belongs to the long-chain O-acyltransferase family.
   
 
  0.608
CCH88932.1
long-chain-fatty-acid--CoA ligase; Function of strongly homologous gene; enzyme.
   
 
 0.586
CCH90773.1
Homologs of previously reported genes of unknown function.
 
    0.586
pgsA
Phosphatidylglycerophosphate synthase; Function of strongly homologous gene; enzyme.
       0.556
adoK
Adenosine kinase; Function of strongly homologous gene; enzyme.
 
 
   0.481
CCH87485.1
Homologs of previously reported genes of unknown function.
  
     0.440
CCH85969.1
Putative glycerophosphatase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
     
 0.413
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.