STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
spkTwo-component serine/threonine-protein kinase PK-1; Function of strongly homologous gene; enzyme. (671 aa)    
Predicted Functional Partners:
CCH88099.1
Homologs of previously reported genes of unknown function.
 
 
 
 0.983
pstP
Serine/threonine protein phosphatase; Function of strongly homologous gene; enzyme.
 
 0.982
pstP-2
PP2C-family Ser/Thr phosphatase (fragment); Function of strongly homologous gene; enzyme.
 
 0.982
CCH85501.1
Homologs of previously reported genes of unknown function.
 
 
 
 0.976
CCH85500.1
Homologs of previously reported genes of unknown function.
 
 
 
 0.968
CCH90052.1
Putative cell division-related protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative cell process.
  
 
 0.962
CCH89894.1
Homologs of previously reported genes of unknown function.
   
 
 0.908
nfo
Endonuclease IV with intrinsic 3'-5' exonuclease activity; Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin.
     
 0.788
CCH90951.1
Homologs of previously reported genes of unknown function.
 
 
 0.755
CCH88133.1
Penicillin-binding protein transpeptidase.
  
 
 0.749
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.