Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| CCH87303.1 | nfo | MODMU_1866 | MODMU_3506 | Homologs of previously reported genes of unknown function. | Endonuclease IV with intrinsic 3'-5' exonuclease activity; Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin. | 0.511 |
| CCH87303.1 | nfo-2 | MODMU_1866 | MODMU_5569 | Homologs of previously reported genes of unknown function. | Endonuclease 4; Function of strongly homologous gene; enzyme. | 0.511 |
| CCH87303.1 | polA | MODMU_1866 | MODMU_3389 | Homologs of previously reported genes of unknown function. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.664 |
| CCH89481.1 | nfo | MODMU_4080 | MODMU_3506 | Homologs of previously reported genes of unknown function. | Endonuclease IV with intrinsic 3'-5' exonuclease activity; Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin. | 0.505 |
| CCH89481.1 | nfo-2 | MODMU_4080 | MODMU_5569 | Homologs of previously reported genes of unknown function. | Endonuclease 4; Function of strongly homologous gene; enzyme. | 0.505 |
| CCH89481.1 | nth | MODMU_4080 | MODMU_0601 | Homologs of previously reported genes of unknown function. | Endonuclease III; DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N-glycosidic bond, leaving an AP (apurinic/apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'- phosphate. | 0.636 |
| CCH89481.1 | polA | MODMU_4080 | MODMU_3389 | Homologs of previously reported genes of unknown function. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.713 |
| CCH89481.1 | xthA | MODMU_4080 | MODMU_5494 | Homologs of previously reported genes of unknown function. | Exodeoxyribonuclease III; Function of strongly homologous gene; enzyme. | 0.900 |
| CCH89508.1 | nfo | MODMU_4107 | MODMU_3506 | Endonuclease/exonuclease/phosphatase. | Endonuclease IV with intrinsic 3'-5' exonuclease activity; Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin. | 0.505 |
| CCH89508.1 | nfo-2 | MODMU_4107 | MODMU_5569 | Endonuclease/exonuclease/phosphatase. | Endonuclease 4; Function of strongly homologous gene; enzyme. | 0.505 |
| CCH89508.1 | nth | MODMU_4107 | MODMU_0601 | Endonuclease/exonuclease/phosphatase. | Endonuclease III; DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N-glycosidic bond, leaving an AP (apurinic/apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'- phosphate. | 0.636 |
| CCH89508.1 | polA | MODMU_4107 | MODMU_3389 | Endonuclease/exonuclease/phosphatase. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.713 |
| Hao | nfo | MODMU_3504 | MODMU_3506 | Hydroxyacid oxidase 1; Function of homologous gene experimentally demonstrated in an other organism; enzyme. | Endonuclease IV with intrinsic 3'-5' exonuclease activity; Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin. | 0.446 |
| Hao | spk | MODMU_3504 | MODMU_3505 | Hydroxyacid oxidase 1; Function of homologous gene experimentally demonstrated in an other organism; enzyme. | Two-component serine/threonine-protein kinase PK-1; Function of strongly homologous gene; enzyme. | 0.454 |
| nfo | CCH87303.1 | MODMU_3506 | MODMU_1866 | Endonuclease IV with intrinsic 3'-5' exonuclease activity; Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin. | Homologs of previously reported genes of unknown function. | 0.511 |
| nfo | CCH89481.1 | MODMU_3506 | MODMU_4080 | Endonuclease IV with intrinsic 3'-5' exonuclease activity; Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin. | Homologs of previously reported genes of unknown function. | 0.505 |
| nfo | CCH89508.1 | MODMU_3506 | MODMU_4107 | Endonuclease IV with intrinsic 3'-5' exonuclease activity; Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin. | Endonuclease/exonuclease/phosphatase. | 0.505 |
| nfo | Hao | MODMU_3506 | MODMU_3504 | Endonuclease IV with intrinsic 3'-5' exonuclease activity; Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin. | Hydroxyacid oxidase 1; Function of homologous gene experimentally demonstrated in an other organism; enzyme. | 0.446 |
| nfo | nfo-2 | MODMU_3506 | MODMU_5569 | Endonuclease IV with intrinsic 3'-5' exonuclease activity; Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin. | Endonuclease 4; Function of strongly homologous gene; enzyme. | 0.920 |
| nfo | nth | MODMU_3506 | MODMU_0601 | Endonuclease IV with intrinsic 3'-5' exonuclease activity; Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin. | Endonuclease III; DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N-glycosidic bond, leaving an AP (apurinic/apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'- phosphate. | 0.554 |
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