STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH88923.1Conserved protein of unknown function; Exonuclease that cleaves single-stranded 3' overhangs of double-stranded RNA. (161 aa)    
Predicted Functional Partners:
CCH89715.1
Phage shock protein A, PspA; Function of strongly homologous gene; cell process.
  
     0.774
CCH90223.1
Monofunctional chorismate mutase; Function of strongly homologous gene; enzyme.
  
     0.774
CCH88924.1
Putative drug resistance transporter; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; transporter.
       0.773
CCH89867.1
Homologs of previously reported genes of unknown function.
  
     0.773
CCH86997.1
Homologs of previously reported genes of unknown function.
  
     0.769
CCH89344.1
Homologs of previously reported genes of unknown function.
  
     0.768
CCH90235.1
Homologs of previously reported genes of unknown function.
  
     0.768
thyX
Thymidylate synthase thyX; Catalyzes the reductive methylation of 2'-deoxyuridine-5'- monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor, and NADPH and FADH(2) as the reductant.
  
     0.760
CCH90185.1
Homologs of previously reported genes of unknown function.
  
     0.751
CCH89341.1
Homologs of previously reported genes of unknown function.
  
     0.736
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.