STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
glcKGlucokinase; Function of homologous gene experimentally demonstrated in an other organism; enzyme. (333 aa)    
Predicted Functional Partners:
ppgK
Polyphosphate glucokinase; Function of strongly homologous gene; enzyme.
     
 0.944
CCH90608.1
PTS system, fructose subfamily, IIC subunit; Function of strongly homologous gene; transporter.
    
 0.941
pgi
Glucose-6-phosphate isomerase 1; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the GPI family.
    
 0.938
pgm
Phosphomannomutase/phosphoglucomutase; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
    
 0.916
CCH90942.1
Inositol 1-phosphate synthase; Function of strongly homologous gene; enzyme.
     
 0.903
aroB
3-dehydroquinate synthase; Catalyzes the conversion of 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ).
 
  
 0.856
CCH88930.1
Putative ion transporting ATPase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
       0.836
CCH88931.1
Polyketide cyclase / dehydrase family protein; Function of strongly homologous gene; enzyme.
       0.836
CCH88929.1
Homologs of previously reported genes of unknown function.
     
 0.821
CCH90074.1
Putative phospho-glucose isomerase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
 
 0.797
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.