STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
CCH88930.1Putative ion transporting ATPase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. (381 aa)    
Predicted Functional Partners:
CCH88931.1
Polyketide cyclase / dehydrase family protein; Function of strongly homologous gene; enzyme.
 
    0.864
glcK
Glucokinase; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
       0.836
CCH88929.1
Homologs of previously reported genes of unknown function.
       0.834
pyrF
Orotidine 5'-phosphate decarboxylase; Function of strongly homologous gene; enzyme; Belongs to the OMP decarboxylase family. Type 2 subfamily.
    
 
 0.719
CCH88932.1
long-chain-fatty-acid--CoA ligase; Function of strongly homologous gene; enzyme.
  
    0.637
CCH85490.1
Rhomboid Peptidase S54; Function of strongly homologous gene; enzyme.
  
   0.485
CCH86839.1
Putative metal-dependent protease of the PAD1/JAB1 superfamily; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
   
   0.453
arsB
Arsenical permease; Function of strongly homologous gene; transporter.
     
 0.417
ileS
Isoleucyl-tRNA synthetase; Catalyzes the attachment of isoleucine to tRNA(Ile). As IleRS can inadvertently accommodate and process structurally similar amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile). Belongs to the class-I aminoacyl-tRNA synthetase family. IleS type 2 subfamily.
    
   0.404
gmk
Guanylate kinase; Essential for recycling GMP and indirectly, cGMP.
    
   0.402
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
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