STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH88932.1long-chain-fatty-acid--CoA ligase; Function of strongly homologous gene; enzyme. (597 aa)    
Predicted Functional Partners:
CCH90218.1
Alpha/beta hydrolase family protein (lipase); Function of strongly homologous gene; enzyme.
  
 
 0.848
estB
Extracellular esterase estB; Function of strongly homologous gene; enzyme.
   
 
 0.823
CCH88064.1
Dolichyl-phosphate beta-D-mannosyltransferase; Function of strongly homologous gene; enzyme.
  
   
 0.741
CCH89609.1
Putative fatty-acid--CoA ligase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
 
0.726
CCH90378.1
Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase; Function of strongly homologous gene; enzyme.
 
 
0.723
rplE
50S ribosomal subunit protein L5; This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits; this bridge is implicated in subunit movement. Contacts the P site tRNA; the 5S rRNA and some of its associated proteins might help stabilize positioning of ribosome-bound tRNAs.
    
 
 0.722
CCH87642.1
Long-chain-fatty-acid--CoA ligase; Function of strongly homologous gene; enzyme.
 
 
0.714
CCH86712.1
Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase; Function of strongly homologous gene; enzyme.
 
 
0.708
fadD
Long chain acyl-CoA synthetase (AMP-forming); Function of strongly homologous gene; enzyme.
 
 
0.707
CCH88812.1
Acyl-CoA thioesterase; Function of strongly homologous gene; enzyme.
   
 
 0.647
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
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