STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH88954.1Homologs of previously reported genes of unknown function. (70 aa)    
Predicted Functional Partners:
CCH90035.1
Homologs of previously reported genes of unknown function.
  
     0.594
CCH90074.1
Putative phospho-glucose isomerase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
     0.528
CCH90389.1
Homologs of previously reported genes of unknown function.
  
     0.525
CCH88955.1
Homologs of previously reported genes of unknown function.
       0.520
CCH88956.1
Homologs of previously reported genes of unknown function.
       0.520
ssb-2
Single-stranded DNA-binding protein ssb; Function of strongly homologous gene; cell process.
  
     0.485
CCH90047.1
Homologs of previously reported genes of unknown function.
  
     0.472
CCH86587.1
GCN5-related N-acetyltransferase.
  
     0.441
CCH88957.1
Homologs of previously reported genes of unknown function.
       0.432
CCH85596.1
Homologs of previously reported genes of unknown function.
  
     0.405
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.