STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH88963.1Conserved hypothetical protein; Homologs of previously reported genes of unknown function. (300 aa)    
Predicted Functional Partners:
CCH90665.1
NAD-dependent epimerase/dehydratase; Function of strongly homologous gene; enzyme.
 
    0.771
sucB
Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex; Function of strongly homologous gene; enzyme.
  
    0.696
arcA
Arginine deiminase; Function of strongly homologous gene; enzyme.
   
    0.581
CCH87410.1
NAD-dependent epimerase/dehydratase; Function of strongly homologous gene; enzyme.
   
    0.581
CCH88789.1
Putative methyltransferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
    0.571
CCH86209.1
Deoxyribodipyrimidine photolyase-related protein; Function of strongly homologous gene; enzyme.
      0.545
CCH87519.1
Putative Pyridoxamine 5'-phosphate oxidase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
    0.545
CCH88830.1
Pyridoxamine 5'-phosphate oxidase-related FMN-binding protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
    0.545
CCH90062.1
Pyridoxamine 5'-phosphate oxidase-related FMN-binding; Function of strongly homologous gene; transporter.
  
    0.545
CCH90760.1
Putative general stress protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
    0.545
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.