STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH88964.1Serine/threonine protein kinase; Function of strongly homologous gene; enzyme. (569 aa)    
Predicted Functional Partners:
pstP
Serine/threonine protein phosphatase; Function of strongly homologous gene; enzyme.
 
 0.840
pstP-2
PP2C-family Ser/Thr phosphatase (fragment); Function of strongly homologous gene; enzyme.
 
 
 0.840
CCH85801.1
Serine/threonine protein kinase; Function of strongly homologous gene; enzyme.
  
     0.775
CCH90951.1
Homologs of previously reported genes of unknown function.
  
     0.660
CCH85501.1
Homologs of previously reported genes of unknown function.
 
 
 
 0.648
pepE
Peptidase S51 dipeptidase E; Function of strongly homologous gene; enzyme; Belongs to the peptidase S51 family.
       0.622
CCH88099.1
Homologs of previously reported genes of unknown function.
 
 
 
 0.598
lipB
Lipoate biosynthesis protein B; Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate- dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate.
       0.582
CCH88965.1
Putative oxidoreductase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
       0.537
CCH85500.1
Homologs of previously reported genes of unknown function.
 
 
 
 0.480
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
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