STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH88970.1ABC-type multidrug transport system, ATPase component (fragment); Function of strongly homologous gene; transporter. (124 aa)    
Predicted Functional Partners:
CCH88971.1
Sulfate-transporting ATPase; Function of strongly homologous gene; enzyme.
     0.991
CCH88969.1
Homologs of previously reported genes of unknown function.
 
  
 0.938
CCH88972.1
Two component histidine kinase dimerization and phosphoacceptor region; Function of strongly homologous gene; enzyme.
 
    0.782
CCH88973.1
Two-component system, NarL family, response regulator DesR; Function of strongly homologous gene; regulator.
 
     0.642
CCH86457.1
ABC-2 type transporter; Function of strongly homologous gene; transporter.
 
    0.548
CCH89370.1
ABC-2 type transporter (modular protein); Function of strongly homologous gene; transporter.
 
  
 0.536
CCH90774.1
ABC-type multidrug transport system, permease component; Function of strongly homologous gene; transporter.
 
  
 0.521
leuS
Leucyl-tRNA synthetase; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the class-I aminoacyl-tRNA synthetase family.
   
   0.520
drrB
Daunorubicin resistance transmembrane protein; Function of strongly homologous gene; transporter.
 
  
 0.507
CCH86520.1
ABC transporter, ATPase; Function of strongly homologous gene; enzyme.
  
     0.498
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.