STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH88972.1Two component histidine kinase dimerization and phosphoacceptor region; Function of strongly homologous gene; enzyme. (351 aa)    
Predicted Functional Partners:
CCH88973.1
Two-component system, NarL family, response regulator DesR; Function of strongly homologous gene; regulator.
 0.995
CCH87196.1
Two-component system, NarL family, response regulator DesR; Function of strongly homologous gene; regulator.
 0.968
CCH87195.1
Two component signal transduction histidine kinase; Function of strongly homologous gene; regulator.
  
  
 
0.922
CCH88969.1
Homologs of previously reported genes of unknown function.
 
    0.850
CCH88970.1
ABC-type multidrug transport system, ATPase component (fragment); Function of strongly homologous gene; transporter.
 
    0.782
pspC
Phage shock protein C, PspC; Function of strongly homologous gene; cell process.
  
  
 0.737
CCH88971.1
Sulfate-transporting ATPase; Function of strongly homologous gene; enzyme.
 
    0.720
CCH87194.1
ABC transporter; Function of strongly homologous gene; transporter.
 
    0.567
CCH88974.1
Homologs of previously reported genes of unknown function.
       0.532
CCH88081.1
Two component signal transduction histidine kinase; Function of strongly homologous gene; enzyme.
  
     0.482
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.