STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
CCH88986.1Putative ribonucleoside-triphosphate reductase activating protein (fragment); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative cell process. (171 aa)    
Predicted Functional Partners:
guaA
GMP synthase [glutamine-hydrolyzing] (Glutamine amidotransferase) (GMP synthetase); Catalyzes the synthesis of GMP from XMP.
     
 0.689
CCH88989.1
AAA ATPase, central domain protein; Function of strongly homologous gene; enzyme.
 
     0.620
folE
GTP cyclohydrolase I; Function of strongly homologous gene; enzyme.
  
  
 0.535
pheT
Phenylalanyl-tRNA synthetase beta chain; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily.
       0.494
CCH88987.1
Homologs of previously reported genes of unknown function.
       0.494
purF
Amidophosphoribosyltransferase; Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine.
  
 
 0.449
CCH85938.1
Lipopolysaccharide biosynthesis protein; Function of strongly homologous gene; enzyme.
 
   
 0.441
CCH88118.1
Non-specific protein-tyrosine kinase; Function of strongly homologous gene; enzyme.
 
   
 0.437
gyrA
DNA gyrase subunit A; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
     
 0.433
pab
Para-aminobenzoate synthase; Function of strongly homologous gene; enzyme.
    
 0.432
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
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